Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.64■□□□□ 0.25
SUMO3P55854 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.64■□□□□ 0.25
SUMO3P55854 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.64■□□□□ 0.25
SUMO3P55854 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SUMO3P55854 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.64■□□□□ 0.25
SUMO3P55854 KRT89P-201ENST00000620027 1478 ntBASIC16.64■□□□□ 0.25
SUMO3P55854 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.64■□□□□ 0.25
SUMO3P55854 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SUMO3P55854 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.64■□□□□ 0.25
SUMO3P55854 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SUMO3P55854 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.64■□□□□ 0.25
SUMO3P55854 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SUMO3P55854 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.63■□□□□ 0.25
SUMO3P55854 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
SUMO3P55854 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SUMO3P55854 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.63■□□□□ 0.25
SUMO3P55854 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.63■□□□□ 0.25
SUMO3P55854 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SUMO3P55854 BICD1-207ENST00000551848 1962 ntBASIC16.63■□□□□ 0.25
SUMO3P55854 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SUMO3P55854 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.63■□□□□ 0.25
SUMO3P55854 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SUMO3P55854 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 AL391807.1-203ENST00000604392 2365 ntBASIC16.62■□□□□ 0.25
SUMO3P55854 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SUMO3P55854 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SUMO3P55854 HLA-F-220ENST00000434407 884 ntBASIC16.62■□□□□ 0.25
SUMO3P55854 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.62■□□□□ 0.25
SUMO3P55854 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.62■□□□□ 0.25
SUMO3P55854 AL359075.1-203ENST00000462729 1002 ntBASIC16.62■□□□□ 0.25
SUMO3P55854 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 KRT18P21-201ENST00000515767 1272 ntBASIC16.62■□□□□ 0.25
SUMO3P55854 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 AC093677.2-201ENST00000600169 1863 ntBASIC16.62■□□□□ 0.25
SUMO3P55854 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SUMO3P55854 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SUMO3P55854 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.61■□□□□ 0.25
SUMO3P55854 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.61■□□□□ 0.25
SUMO3P55854 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.61■□□□□ 0.25
SUMO3P55854 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.61■□□□□ 0.25
SUMO3P55854 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.61■□□□□ 0.25
SUMO3P55854 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.61■□□□□ 0.25
SUMO3P55854 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SUMO3P55854 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SUMO3P55854 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SUMO3P55854 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.61■□□□□ 0.25
SUMO3P55854 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
SUMO3P55854 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
SUMO3P55854 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
SUMO3P55854 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SUMO3P55854 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.6■□□□□ 0.25
SUMO3P55854 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
SUMO3P55854 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SUMO3P55854 AC104581.1-202ENST00000635932 2618 ntBASIC16.6■□□□□ 0.25
SUMO3P55854 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SUMO3P55854 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 AC135050.7-201ENST00000624508 2218 ntBASIC16.6■□□□□ 0.25
SUMO3P55854 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SUMO3P55854 KRT18P38-201ENST00000449496 1282 ntBASIC16.6■□□□□ 0.25
SUMO3P55854 AC113404.2-201ENST00000507884 177 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms