Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 PCDHB18P-201ENST00000524813 2368 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKN2DP55273 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKN2DP55273 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2DP55273 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CDKN2DP55273 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDKN2DP55273 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 ECEL1P2-202ENST00000465689 757 ntBASIC18.16■□□□□ 0.5
CDKN2DP55273 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2DP55273 AC104390.1-201ENST00000555663 520 ntBASIC18.16■□□□□ 0.5
CDKN2DP55273 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDKN2DP55273 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.16■□□□□ 0.5
CDKN2DP55273 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDKN2DP55273 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2DP55273 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDKN2DP55273 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2DP55273 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2DP55273 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2DP55273 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2DP55273 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKN2DP55273 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2DP55273 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDKN2DP55273 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKN2DP55273 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKN2DP55273 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2DP55273 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2DP55273 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2DP55273 LETM1P2-201ENST00000597330 2178 ntBASIC18.14■□□□□ 0.49
CDKN2DP55273 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKN2DP55273 AC128688.1-201ENST00000487626 519 ntBASIC18.14■□□□□ 0.49
CDKN2DP55273 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.14■□□□□ 0.49
CDKN2DP55273 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKN2DP55273 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2DP55273 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 AC066615.1-201ENST00000640911 628 ntBASIC18.14■□□□□ 0.49
CDKN2DP55273 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKN2DP55273 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2DP55273 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2DP55273 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKN2DP55273 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 LINC01126-201ENST00000623515 1646 ntBASIC18.13■□□□□ 0.49
CDKN2DP55273 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms