Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A1P43005 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A1P43005 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A1P43005 AC008550.1-201ENST00000511500 884 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A1P43005 BX088651.1-201ENST00000540551 451 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC1A1P43005 AC009065.1-201ENST00000564055 1225 ntBASIC19.25■□□□□ 0.67
SLC1A1P43005 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A1P43005 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC1A1P43005 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 MIR3180-4-201ENST00000582223 153 ntBASIC19.24■□□□□ 0.67
SLC1A1P43005 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC1A1P43005 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A1P43005 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC1A1P43005 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A1P43005 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A1P43005 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC1A1P43005 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC1A1P43005 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 AC116562.4-202ENST00000641738 218 ntBASIC19.23■□□□□ 0.67
SLC1A1P43005 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC1A1P43005 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC1A1P43005 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC1A1P43005 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC1A1P43005 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC1A1P43005 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC1A1P43005 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms