Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC3P40938 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC3P40938 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFC3P40938 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.82■□□□□ 0.28
RFC3P40938 ATP5G2P1-201ENST00000433580 426 ntBASIC16.82■□□□□ 0.28
RFC3P40938 AL121672.3-201ENST00000608644 468 ntBASIC16.82■□□□□ 0.28
RFC3P40938 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFC3P40938 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC3P40938 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFC3P40938 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.82■□□□□ 0.28
RFC3P40938 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
RFC3P40938 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.81■□□□□ 0.28
RFC3P40938 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
RFC3P40938 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 TSPY22P-201ENST00000427496 604 ntBASIC16.81■□□□□ 0.28
RFC3P40938 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.81■□□□□ 0.28
RFC3P40938 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.81■□□□□ 0.28
RFC3P40938 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
RFC3P40938 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFC3P40938 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFC3P40938 AC092329.2-201ENST00000598402 547 ntBASIC16.81■□□□□ 0.28
RFC3P40938 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.81■□□□□ 0.28
RFC3P40938 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 AC020916.1-201ENST00000587762 1774 ntBASIC16.81■□□□□ 0.28
RFC3P40938 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFC3P40938 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFC3P40938 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC3P40938 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RFC3P40938 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 MIR662-201ENST00000384847 95 ntBASIC16.8■□□□□ 0.28
RFC3P40938 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFC3P40938 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.8■□□□□ 0.28
RFC3P40938 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.8■□□□□ 0.28
RFC3P40938 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.8■□□□□ 0.28
RFC3P40938 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RFC3P40938 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFC3P40938 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFC3P40938 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RFC3P40938 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 Z83836.1-201ENST00000624605 1642 ntBASIC16.79■□□□□ 0.28
RFC3P40938 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RFC3P40938 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
RFC3P40938 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.79■□□□□ 0.28
RFC3P40938 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.79■□□□□ 0.28
RFC3P40938 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.79■□□□□ 0.28
RFC3P40938 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 AP002414.4-201ENST00000589764 1148 ntBASIC16.79■□□□□ 0.28
RFC3P40938 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms