Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
CLCN1P35523 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.92■□□□□ 0.94
CLCN1P35523 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.92■□□□□ 0.94
CLCN1P35523 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CLCN1P35523 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CLCN1P35523 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.91■□□□□ 0.94
CLCN1P35523 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCN1P35523 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 AL121829.2-201ENST00000620908 328 ntBASIC20.91■□□□□ 0.94
CLCN1P35523 AL121906.2-201ENST00000621597 723 ntBASIC20.91■□□□□ 0.94
CLCN1P35523 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN1P35523 DOC2GP-204ENST00000639052 2548 ntBASIC20.91■□□□□ 0.94
CLCN1P35523 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLCN1P35523 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLCN1P35523 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.9■□□□□ 0.94
CLCN1P35523 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLCN1P35523 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 AC092850.2-201ENST00000623821 2697 ntBASIC20.9■□□□□ 0.94
CLCN1P35523 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLCN1P35523 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 AC083906.6-201ENST00000641366 219 ntBASIC20.9■□□□□ 0.94
CLCN1P35523 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCN1P35523 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLCN1P35523 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN1P35523 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CLCN1P35523 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.89■□□□□ 0.94
CLCN1P35523 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN1P35523 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN1P35523 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.89■□□□□ 0.94
CLCN1P35523 LINC00554-201ENST00000564841 3011 ntBASIC20.89■□□□□ 0.94
CLCN1P35523 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.89■□□□□ 0.94
CLCN1P35523 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN1P35523 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLCN1P35523 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCN1P35523 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms