Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 KRASP1-201ENST00000407852 552 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 KRT16P5-201ENST00000455284 522 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.72■□□□□ 0.43
CAPN3P20807 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 AL023875.1-201ENST00000640777 796 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 AC092865.7-201ENST00000641832 219 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CAPN3P20807 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPN3P20807 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 AC091390.4-202ENST00000476426 537 ntBASIC17.71■□□□□ 0.43
CAPN3P20807 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.71■□□□□ 0.43
CAPN3P20807 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 AL355075.4-201ENST00000554988 638 ntBASIC17.71■□□□□ 0.43
CAPN3P20807 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN3P20807 RN7SL850P-201ENST00000579959 291 ntBASIC17.71■□□□□ 0.43
CAPN3P20807 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPN3P20807 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CAPN3P20807 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CAPN3P20807 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CAPN3P20807 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CAPN3P20807 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.71■□□□□ 0.43
CAPN3P20807 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN3P20807 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.71■□□□□ 0.42
CAPN3P20807 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN3P20807 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CAPN3P20807 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CAPN3P20807 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
CAPN3P20807 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN3P20807 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN3P20807 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 AC131212.4-201ENST00000623606 975 ntBASIC17.7■□□□□ 0.42
CAPN3P20807 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN3P20807 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN3P20807 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CAPN3P20807 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN3P20807 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN3P20807 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN3P20807 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN3P20807 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms