Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB4AP20338 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB4AP20338 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 AL136967.2-201ENST00000623968 743 ntBASIC14.1□□□□□ -0.15
RAB4AP20338 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB4AP20338 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 AC022211.2-201ENST00000585075 2527 ntBASIC14.1□□□□□ -0.15
RAB4AP20338 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB4AP20338 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB4AP20338 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 AC096631.2-201ENST00000436136 790 ntBASIC14.09□□□□□ -0.15
RAB4AP20338 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB4AP20338 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB4AP20338 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB4AP20338 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB4AP20338 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB4AP20338 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB4AP20338 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB4AP20338 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RAB4AP20338 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
RAB4AP20338 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB4AP20338 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.08□□□□□ -0.15
RAB4AP20338 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB4AP20338 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
RAB4AP20338 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB4AP20338 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB4AP20338 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms