Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.43■□□□□ 0.38
LAMP1P11279 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 AL390955.1-201ENST00000428694 934 ntBASIC17.43■□□□□ 0.38
LAMP1P11279 SLC25A1P2-201ENST00000430693 912 ntBASIC17.43■□□□□ 0.38
LAMP1P11279 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.43■□□□□ 0.38
LAMP1P11279 AL353719.1-201ENST00000566847 864 ntBASIC17.43■□□□□ 0.38
LAMP1P11279 AP000525.1-201ENST00000608286 694 ntBASIC17.43■□□□□ 0.38
LAMP1P11279 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.43■□□□□ 0.38
LAMP1P11279 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.43■□□□□ 0.38
LAMP1P11279 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.43■□□□□ 0.38
LAMP1P11279 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LAMP1P11279 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.43■□□□□ 0.38
LAMP1P11279 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
LAMP1P11279 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
LAMP1P11279 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LAMP1P11279 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 CR769767.2-201ENST00000622735 460 ntBASIC17.42■□□□□ 0.38
LAMP1P11279 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMP1P11279 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMP1P11279 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMP1P11279 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMP1P11279 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 HOXB1-202ENST00000577092 1414 ntBASIC17.41■□□□□ 0.38
LAMP1P11279 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LAMP1P11279 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMP1P11279 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 MIR718-201ENST00000390190 70 ntBASIC17.41■□□□□ 0.38
LAMP1P11279 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMP1P11279 TSPY17P-201ENST00000450329 467 ntBASIC17.41■□□□□ 0.38
LAMP1P11279 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMP1P11279 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMP1P11279 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 FITM1-202ENST00000559294 800 ntBASIC17.41■□□□□ 0.38
LAMP1P11279 MIR4785-201ENST00000585005 73 ntBASIC17.41■□□□□ 0.38
LAMP1P11279 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMP1P11279 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMP1P11279 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMP1P11279 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms