Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.06■□□□□ 0.64
CD48P09326 AC104390.1-201ENST00000555663 520 ntBASIC19.06■□□□□ 0.64
CD48P09326 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.06■□□□□ 0.64
CD48P09326 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 AC067852.2-201ENST00000590513 2313 ntBASIC19.06■□□□□ 0.64
CD48P09326 GMCL1P1-201ENST00000463439 1581 ntBASIC19.06■□□□□ 0.64
CD48P09326 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 NOC2LP2-201ENST00000407594 1944 ntBASIC19.06■□□□□ 0.64
CD48P09326 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 AL096828.2-201ENST00000567259 1965 ntBASIC19.05■□□□□ 0.64
CD48P09326 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 HMGA1P5-201ENST00000412453 271 ntBASIC19.05■□□□□ 0.64
CD48P09326 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.05■□□□□ 0.64
CD48P09326 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.05■□□□□ 0.64
CD48P09326 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 AC024243.1-201ENST00000609234 778 ntBASIC19.05■□□□□ 0.64
CD48P09326 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CD48P09326 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD48P09326 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.05■□□□□ 0.64
CD48P09326 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.04■□□□□ 0.64
CD48P09326 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.04■□□□□ 0.64
CD48P09326 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.04■□□□□ 0.64
CD48P09326 SEC1P-202ENST00000473944 940 ntBASIC19.04■□□□□ 0.64
CD48P09326 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.04■□□□□ 0.64
CD48P09326 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.04■□□□□ 0.64
CD48P09326 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.04■□□□□ 0.64
CD48P09326 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.04■□□□□ 0.64
CD48P09326 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CD48P09326 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CD48P09326 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CD48P09326 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD48P09326 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 LINC01126-201ENST00000623515 1646 ntBASIC19.03■□□□□ 0.64
CD48P09326 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CD48P09326 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.03■□□□□ 0.64
CD48P09326 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.03■□□□□ 0.64
CD48P09326 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CD48P09326 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 AC145285.6-201ENST00000604632 637 ntBASIC19.03■□□□□ 0.64
CD48P09326 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.03■□□□□ 0.64
CD48P09326 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.03■□□□□ 0.64
CD48P09326 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CD48P09326 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms