Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC132008.2-207ENST00000454517 770 ntBASIC19.01■□□□□ 0.63
RHOP08100 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.01■□□□□ 0.63
RHOP08100 RNA5SP419-201ENST00000515908 135 ntBASIC19.01■□□□□ 0.63
RHOP08100 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
RHOP08100 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.01■□□□□ 0.63
RHOP08100 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.01■□□□□ 0.63
RHOP08100 AC005336.2-201ENST00000593183 939 ntBASIC19.01■□□□□ 0.63
RHOP08100 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.01■□□□□ 0.63
RHOP08100 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RHOP08100 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.01■□□□□ 0.63
RHOP08100 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHOP08100 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHOP08100 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RHOP08100 AC112777.1-201ENST00000540175 1423 ntBASIC19■□□□□ 0.63
RHOP08100 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RHOP08100 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 CCS-201ENST00000310190 942 ntTSL 5 BASIC19■□□□□ 0.63
RHOP08100 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RHOP08100 RCN1P2-201ENST00000398357 915 ntBASIC19■□□□□ 0.63
RHOP08100 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RHOP08100 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RHOP08100 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RHOP08100 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19■□□□□ 0.63
RHOP08100 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RHOP08100 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19■□□□□ 0.63
RHOP08100 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHOP08100 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19■□□□□ 0.63
RHOP08100 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.99■□□□□ 0.63
RHOP08100 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.99■□□□□ 0.63
RHOP08100 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.99■□□□□ 0.63
RHOP08100 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.99■□□□□ 0.63
RHOP08100 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 AC008608.2-201ENST00000606089 416 ntBASIC18.99■□□□□ 0.63
RHOP08100 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.99■□□□□ 0.63
RHOP08100 AC005332.7-201ENST00000614046 2005 ntBASIC18.99■□□□□ 0.63
RHOP08100 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHOP08100 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.98■□□□□ 0.63
RHOP08100 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 TP73-AS1-210ENST00000637775 1455 ntBASIC18.98■□□□□ 0.63
RHOP08100 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RHOP08100 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.98■□□□□ 0.63
RHOP08100 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.98■□□□□ 0.63
RHOP08100 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 KRT18P67-201ENST00000432816 1264 ntBASIC18.98■□□□□ 0.63
RHOP08100 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.98■□□□□ 0.63
RHOP08100 AL671883.3-201ENST00000603274 991 ntBASIC18.98■□□□□ 0.63
RHOP08100 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.98■□□□□ 0.63
RHOP08100 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RHOP08100 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.98■□□□□ 0.63
RHOP08100 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.98■□□□□ 0.63
RHOP08100 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHOP08100 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.97■□□□□ 0.63
RHOP08100 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.97■□□□□ 0.63
RHOP08100 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 AL031284.1-201ENST00000419297 478 ntBASIC18.97■□□□□ 0.63
RHOP08100 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 AF186996.4-201ENST00000467186 377 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms