Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
GGPS1O95749 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.61■□□□□ 0.89
GGPS1O95749 TSPY19P-201ENST00000418461 509 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
GGPS1O95749 AL845331.1-201ENST00000424978 1190 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 TSPY18P-201ENST00000441642 509 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 FOSL1P1-201ENST00000511041 816 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 AC074051.2-201ENST00000565115 352 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 IFNL4P1-201ENST00000607083 540 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 AC004263.2-201ENST00000617183 678 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
GGPS1O95749 AC009102.3-201ENST00000623118 1491 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
GGPS1O95749 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GGPS1O95749 LINC00167-201ENST00000530583 1419 ntBASIC20.61■□□□□ 0.89
GGPS1O95749 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.61■□□□□ 0.89
GGPS1O95749 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GGPS1O95749 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.6■□□□□ 0.89
GGPS1O95749 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.6■□□□□ 0.89
GGPS1O95749 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.6■□□□□ 0.89
GGPS1O95749 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GGPS1O95749 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GGPS1O95749 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GGPS1O95749 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.6■□□□□ 0.89
GGPS1O95749 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GGPS1O95749 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GGPS1O95749 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 MYLKP1-201ENST00000509077 1580 ntBASIC20.59■□□□□ 0.89
GGPS1O95749 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GGPS1O95749 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.59■□□□□ 0.89
GGPS1O95749 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.59■□□□□ 0.89
GGPS1O95749 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.59■□□□□ 0.89
GGPS1O95749 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.59■□□□□ 0.89
GGPS1O95749 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 AL499627.1-201ENST00000569373 2188 ntBASIC20.59■□□□□ 0.89
GGPS1O95749 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GGPS1O95749 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.59■□□□□ 0.89
GGPS1O95749 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
GGPS1O95749 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
GGPS1O95749 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
GGPS1O95749 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
GGPS1O95749 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 AC004870.1-201ENST00000315132 882 ntBASIC20.58■□□□□ 0.89
GGPS1O95749 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.58■□□□□ 0.89
GGPS1O95749 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.58■□□□□ 0.89
GGPS1O95749 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GGPS1O95749 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.58■□□□□ 0.89
GGPS1O95749 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms