Protein–RNA interactions for Protein: O75603

GCM2, Chorion-specific transcription factor GCMb, humanhuman

Predicted RBP Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM2O75603 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.11■□□□□ 0.33
GCM2O75603 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.11■□□□□ 0.33
GCM2O75603 SLC25A1P4-201ENST00000567977 778 ntBASIC17.11■□□□□ 0.33
GCM2O75603 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.11■□□□□ 0.33
GCM2O75603 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.11■□□□□ 0.33
GCM2O75603 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.11■□□□□ 0.33
GCM2O75603 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
GCM2O75603 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.11■□□□□ 0.33
GCM2O75603 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
GCM2O75603 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCM2O75603 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 UNC93B2-201ENST00000285383 730 ntBASIC17.1■□□□□ 0.33
GCM2O75603 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GCM2O75603 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.1■□□□□ 0.33
GCM2O75603 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.1■□□□□ 0.33
GCM2O75603 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM2O75603 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM2O75603 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM2O75603 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GCM2O75603 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 DGCR10-201ENST00000609839 495 ntBASIC17.09■□□□□ 0.33
GCM2O75603 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 AC036111.1-201ENST00000533973 1582 ntBASIC17.09■□□□□ 0.33
GCM2O75603 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GCM2O75603 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM2O75603 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM2O75603 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.08■□□□□ 0.33
GCM2O75603 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GCM2O75603 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.08■□□□□ 0.32
GCM2O75603 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GCM2O75603 AL163051.1-201ENST00000569214 1512 ntBASIC17.08■□□□□ 0.32
GCM2O75603 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 ECEL1P3-201ENST00000427961 737 ntBASIC17.08■□□□□ 0.32
GCM2O75603 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.08■□□□□ 0.32
GCM2O75603 CA15P1-201ENST00000481698 905 ntBASIC17.08■□□□□ 0.32
GCM2O75603 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.08■□□□□ 0.32
GCM2O75603 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.08■□□□□ 0.32
GCM2O75603 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.08■□□□□ 0.32
GCM2O75603 AP000525.1-201ENST00000608286 694 ntBASIC17.08■□□□□ 0.32
GCM2O75603 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GCM2O75603 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.08■□□□□ 0.32
GCM2O75603 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GCM2O75603 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.07■□□□□ 0.32
GCM2O75603 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GCM2O75603 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms