Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 AP000867.4-201ENST00000641616 219 ntBASIC8.16□□□□□ -1.1
USH2AO75445 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC8.16□□□□□ -1.1
USH2AO75445 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
USH2AO75445 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
USH2AO75445 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 CTNS-203ENST00000399306 803 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 AL132655.2-201ENST00000596276 594 ntBASIC8.16□□□□□ -1.1
USH2AO75445 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 GPR89P-201ENST00000407924 1495 ntBASIC8.15□□□□□ -1.1
USH2AO75445 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC8.15□□□□□ -1.1
USH2AO75445 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC8.15□□□□□ -1.1
USH2AO75445 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC8.15□□□□□ -1.1
USH2AO75445 AC004706.3-202ENST00000621574 984 ntBASIC8.15□□□□□ -1.1
USH2AO75445 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC8.15□□□□□ -1.1
USH2AO75445 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 MIR943-201ENST00000401286 94 ntBASIC8.15□□□□□ -1.1
USH2AO75445 ELP6-205ENST00000439305 880 ntTSL 2 BASIC8.15□□□□□ -1.1
USH2AO75445 RNA5SP421-201ENST00000516864 134 ntBASIC8.15□□□□□ -1.1
USH2AO75445 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC8.15□□□□□ -1.1
USH2AO75445 MIR4525-201ENST00000580000 75 ntBASIC8.15□□□□□ -1.1
USH2AO75445 AC022145.2-201ENST00000598203 171 ntBASIC8.15□□□□□ -1.1
USH2AO75445 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC8.15□□□□□ -1.1
USH2AO75445 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USH2AO75445 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 IGLL3P-201ENST00000412472 434 ntBASIC8.15□□□□□ -1.11
USH2AO75445 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 AC023141.5-201ENST00000458585 616 ntBASIC8.15□□□□□ -1.11
USH2AO75445 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC8.15□□□□□ -1.11
USH2AO75445 AC068472.1-201ENST00000474589 881 ntBASIC8.15□□□□□ -1.11
USH2AO75445 CECR7-204ENST00000609932 568 ntTSL 2 BASIC8.15□□□□□ -1.11
USH2AO75445 HFE2-206ENST00000634927 506 ntTSL 4 BASIC8.15□□□□□ -1.11
USH2AO75445 AC105339.1-204ENST00000636249 355 ntBASIC8.15□□□□□ -1.11
USH2AO75445 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
USH2AO75445 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
USH2AO75445 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC8.15□□□□□ -1.11
USH2AO75445 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
USH2AO75445 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC8.15□□□□□ -1.11
USH2AO75445 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC8.15□□□□□ -1.11
USH2AO75445 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
USH2AO75445 AC091812.2-201ENST00000619081 385 ntBASIC8.15□□□□□ -1.11
USH2AO75445 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC8.14□□□□□ -1.11
USH2AO75445 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 AL512408.1-201ENST00000569378 2000 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms