Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.14■□□□□ 0.65
LRCH4O75427 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.14■□□□□ 0.65
LRCH4O75427 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.14■□□□□ 0.65
LRCH4O75427 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
LRCH4O75427 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.14■□□□□ 0.65
LRCH4O75427 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.14■□□□□ 0.65
LRCH4O75427 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRCH4O75427 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.14■□□□□ 0.65
LRCH4O75427 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.65
LRCH4O75427 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.14■□□□□ 0.65
LRCH4O75427 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.14■□□□□ 0.65
LRCH4O75427 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 SLC25A3P1-201ENST00000443844 931 ntBASIC19.13■□□□□ 0.65
LRCH4O75427 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.13■□□□□ 0.65
LRCH4O75427 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 AC009065.1-201ENST00000564055 1225 ntBASIC19.13■□□□□ 0.65
LRCH4O75427 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.13■□□□□ 0.65
LRCH4O75427 AC012306.2-201ENST00000609350 630 ntBASIC19.13■□□□□ 0.65
LRCH4O75427 AL138966.2-201ENST00000621997 464 ntBASIC19.13■□□□□ 0.65
LRCH4O75427 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LRCH4O75427 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRCH4O75427 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.13■□□□□ 0.65
LRCH4O75427 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LRCH4O75427 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
LRCH4O75427 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH4O75427 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH4O75427 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRCH4O75427 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRCH4O75427 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LRCH4O75427 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRCH4O75427 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRCH4O75427 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRCH4O75427 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRCH4O75427 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 AC073912.3-201ENST00000624414 853 ntBASIC19.12■□□□□ 0.65
LRCH4O75427 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH4O75427 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH4O75427 AL024508.2-201ENST00000607749 1894 ntBASIC19.11■□□□□ 0.65
LRCH4O75427 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.11■□□□□ 0.65
LRCH4O75427 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH4O75427 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms