Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16■□□□□ 0.15
XRCC2O43543 AL133373.2-201ENST00000623187 2828 ntBASIC16■□□□□ 0.15
XRCC2O43543 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
XRCC2O43543 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
XRCC2O43543 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.99■□□□□ 0.15
XRCC2O43543 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 MMP23A-201ENST00000234610 1017 ntBASIC15.99■□□□□ 0.15
XRCC2O43543 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 KRT18P23-201ENST00000435622 1283 ntBASIC15.99■□□□□ 0.15
XRCC2O43543 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.99■□□□□ 0.15
XRCC2O43543 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.99■□□□□ 0.15
XRCC2O43543 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.99■□□□□ 0.15
XRCC2O43543 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 AL354751.1-201ENST00000412768 1863 ntBASIC15.99■□□□□ 0.15
XRCC2O43543 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.99■□□□□ 0.15
XRCC2O43543 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.99■□□□□ 0.15
XRCC2O43543 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
XRCC2O43543 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.99■□□□□ 0.15
XRCC2O43543 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.98■□□□□ 0.15
XRCC2O43543 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.98■□□□□ 0.15
XRCC2O43543 ABALON-201ENST00000629058 1903 ntBASIC15.98■□□□□ 0.15
XRCC2O43543 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.98■□□□□ 0.15
XRCC2O43543 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
XRCC2O43543 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
XRCC2O43543 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.98■□□□□ 0.15
XRCC2O43543 AL512604.3-201ENST00000569583 964 ntBASIC15.98■□□□□ 0.15
XRCC2O43543 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.98■□□□□ 0.15
XRCC2O43543 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
XRCC2O43543 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.98■□□□□ 0.15
XRCC2O43543 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.98■□□□□ 0.15
XRCC2O43543 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
XRCC2O43543 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
XRCC2O43543 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
XRCC2O43543 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
XRCC2O43543 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
XRCC2O43543 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.97■□□□□ 0.15
XRCC2O43543 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.97■□□□□ 0.15
XRCC2O43543 AC093827.2-201ENST00000512654 315 ntBASIC15.97■□□□□ 0.15
XRCC2O43543 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC2O43543 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.97■□□□□ 0.15
XRCC2O43543 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.97■□□□□ 0.15
XRCC2O43543 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XRCC2O43543 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms