Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AP001005.1-201ENST00000571755 1248 ntBASIC19.64■□□□□ 0.73
HOXA2O43364 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXA2O43364 AL773604.1-201ENST00000617417 272 ntBASIC19.64■□□□□ 0.73
HOXA2O43364 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA2O43364 SDHAP2-201ENST00000455183 2001 ntBASIC19.64■□□□□ 0.73
HOXA2O43364 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA2O43364 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA2O43364 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA2O43364 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA2O43364 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA2O43364 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXA2O43364 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA2O43364 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
HOXA2O43364 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA2O43364 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 FAM197Y8-203ENST00000450145 560 ntBASIC19.63■□□□□ 0.73
HOXA2O43364 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXA2O43364 AF186996.4-201ENST00000467186 377 ntBASIC19.63■□□□□ 0.73
HOXA2O43364 AC009533.2-201ENST00000543664 586 ntBASIC19.63■□□□□ 0.73
HOXA2O43364 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HOXA2O43364 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA2O43364 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXA2O43364 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.63■□□□□ 0.73
HOXA2O43364 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA2O43364 AL024508.2-201ENST00000607749 1894 ntBASIC19.62■□□□□ 0.73
HOXA2O43364 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXA2O43364 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HOXA2O43364 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXA2O43364 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA2O43364 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA2O43364 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA2O43364 KRT18P67-201ENST00000432816 1264 ntBASIC19.62■□□□□ 0.73
HOXA2O43364 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA2O43364 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 AC120114.3-201ENST00000611923 658 ntBASIC19.62■□□□□ 0.73
HOXA2O43364 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 TP73-AS1-207ENST00000624167 988 ntBASIC19.62■□□□□ 0.73
HOXA2O43364 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA2O43364 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA2O43364 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA2O43364 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HOXA2O43364 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HOXA2O43364 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HOXA2O43364 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 AL590627.1-203ENST00000421194 1026 ntBASIC19.61■□□□□ 0.73
HOXA2O43364 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.61■□□□□ 0.73
HOXA2O43364 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HOXA2O43364 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.61■□□□□ 0.73
HOXA2O43364 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA2O43364 AC008608.2-201ENST00000606089 416 ntBASIC19.61■□□□□ 0.73
HOXA2O43364 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA2O43364 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA2O43364 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXA2O43364 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXA2O43364 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXA2O43364 TP73-AS1-210ENST00000637775 1455 ntBASIC19.6■□□□□ 0.73
HOXA2O43364 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
HOXA2O43364 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXA2O43364 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXA2O43364 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXA2O43364 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXA2O43364 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXA2O43364 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms