Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RRP8O43159 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.26■□□□□ 0.35
RRP8O43159 AC040169.1-201ENST00000565382 521 ntBASIC17.26■□□□□ 0.35
RRP8O43159 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.26■□□□□ 0.35
RRP8O43159 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.26■□□□□ 0.35
RRP8O43159 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
RRP8O43159 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RRP8O43159 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.26■□□□□ 0.35
RRP8O43159 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RRP8O43159 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.25■□□□□ 0.35
RRP8O43159 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.25■□□□□ 0.35
RRP8O43159 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
RRP8O43159 FGFR3P6-201ENST00000457012 610 ntBASIC17.25■□□□□ 0.35
RRP8O43159 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.25■□□□□ 0.35
RRP8O43159 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.25■□□□□ 0.35
RRP8O43159 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.25■□□□□ 0.35
RRP8O43159 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.25■□□□□ 0.35
RRP8O43159 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.25■□□□□ 0.35
RRP8O43159 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RRP8O43159 HLA-J-201ENST00000462773 1622 ntBASIC17.25■□□□□ 0.35
RRP8O43159 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.25■□□□□ 0.35
RRP8O43159 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RRP8O43159 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RRP8O43159 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
RRP8O43159 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.24■□□□□ 0.35
RRP8O43159 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.24■□□□□ 0.35
RRP8O43159 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.24■□□□□ 0.35
RRP8O43159 KRT18P3-201ENST00000451602 1288 ntBASIC17.24■□□□□ 0.35
RRP8O43159 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.24■□□□□ 0.35
RRP8O43159 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.24■□□□□ 0.35
RRP8O43159 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
RRP8O43159 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RRP8O43159 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RRP8O43159 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RRP8O43159 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 PCDHAC2-203ENST00000615316 3011 ntBASIC17.23■□□□□ 0.35
RRP8O43159 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RRP8O43159 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RRP8O43159 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RRP8O43159 HNRNPDP1-201ENST00000439535 754 ntBASIC17.23■□□□□ 0.35
RRP8O43159 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.23■□□□□ 0.35
RRP8O43159 AC112482.1-201ENST00000492080 688 ntBASIC17.23■□□□□ 0.35
RRP8O43159 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
RRP8O43159 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RRP8O43159 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.23■□□□□ 0.35
RRP8O43159 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.23■□□□□ 0.35
RRP8O43159 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms