Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 FAM86EP-206ENST00000510506 987 ntBASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 AC091076.1-201ENST00000610741 619 ntBASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 AC083849.1-201ENST00000615227 514 ntBASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.59■□□□□ 0.89
COL4A3BPQ9Y5P4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A3BPQ9Y5P4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 LINC01311-201ENST00000565162 1445 ntBASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A3BPQ9Y5P4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 MYLKP1-201ENST00000509077 1580 ntBASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 AC126763.1-201ENST00000552015 2118 ntBASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 AC073592.3-201ENST00000625118 1834 ntBASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A3BPQ9Y5P4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 KRT8P50-201ENST00000562022 1438 ntBASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 PCED1CP-201ENST00000419887 785 ntBASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF444P1-201ENST00000559497 298 ntBASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 AP000550.4-202ENST00000639755 178 ntBASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.56■□□□□ 0.88
COL4A3BPQ9Y5P4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms