Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 LINC01465-201ENST00000408887 1940 ntBASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN4Q9Y3Q4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN4Q9Y3Q4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HCN4Q9Y3Q4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN4Q9Y3Q4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN4Q9Y3Q4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 AC096582.2-201ENST00000510860 516 ntBASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 AP001269.4-201ENST00000609611 512 ntBASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN4Q9Y3Q4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 KRT18P23-201ENST00000435622 1283 ntBASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 AC114341.1-201ENST00000618070 349 ntBASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HCN4Q9Y3Q4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 TCF3P1-201ENST00000423021 1937 ntBASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AC007967.2-201ENST00000432613 625 ntBASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 MTDHP3-201ENST00000594186 672 ntBASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AC012645.4-201ENST00000610691 1061 ntBASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN4Q9Y3Q4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms