Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4E1Q9UPM8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
AP4E1Q9UPM8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 AC009065.1-201ENST00000564055 1225 ntBASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP4E1Q9UPM8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 ESPNP-201ENST00000270691 2015 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 AL354751.1-201ENST00000412768 1863 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 TERF1P1-201ENST00000311003 1181 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 MIR3180-4-201ENST00000582223 153 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 LINC01023-201ENST00000606054 436 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 AC135776.1-201ENST00000319817 2481 ntBASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
AP4E1Q9UPM8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AL137013.1-201ENST00000432946 1228 ntBASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.09■□□□□ 0.65
AP4E1Q9UPM8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 AL390961.4-201ENST00000623958 2535 ntBASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms