Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR6786-201ENST00000616843 113 ntBASIC21.11■□□□□ 0.97
USP25Q9UHP3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP25Q9UHP3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP25Q9UHP3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP25Q9UHP3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP25Q9UHP3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.11■□□□□ 0.97
USP25Q9UHP3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP25Q9UHP3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 FSCN1P1-201ENST00000568912 1481 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 B3GAT3P1-201ENST00000471720 806 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 AC011506.1-201ENST00000474329 610 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 FAM197Y4-202ENST00000622692 608 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 HTR7P1-202ENST00000624664 4411 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.1■□□□□ 0.97
USP25Q9UHP3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP25Q9UHP3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP25Q9UHP3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 AP000692.2-201ENST00000608391 879 ntBASIC21.09■□□□□ 0.97
USP25Q9UHP3 HCG11-201ENST00000411553 5696 ntBASIC21.09■□□□□ 0.97
USP25Q9UHP3 AC112777.1-201ENST00000540175 1423 ntBASIC21.09■□□□□ 0.97
USP25Q9UHP3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.09■□□□□ 0.97
USP25Q9UHP3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP25Q9UHP3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP25Q9UHP3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP25Q9UHP3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP25Q9UHP3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP25Q9UHP3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP25Q9UHP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.08■□□□□ 0.97
USP25Q9UHP3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP25Q9UHP3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
USP25Q9UHP3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP25Q9UHP3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP25Q9UHP3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP25Q9UHP3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP25Q9UHP3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms