Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 HOMER2P1-201ENST00000455653 964 ntBASIC17.34■□□□□ 0.37
KLHL1Q9NR64 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 MYC-208ENST00000641036 567 ntBASIC17.34■□□□□ 0.37
KLHL1Q9NR64 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KLHL1Q9NR64 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.33■□□□□ 0.37
KLHL1Q9NR64 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
KLHL1Q9NR64 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 AP000523.1-201ENST00000398242 1049 ntBASIC17.33■□□□□ 0.36
KLHL1Q9NR64 UPK3BP1-201ENST00000428678 509 ntBASIC17.33■□□□□ 0.36
KLHL1Q9NR64 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 AC091076.1-201ENST00000610741 619 ntBASIC17.33■□□□□ 0.36
KLHL1Q9NR64 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KLHL1Q9NR64 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.32■□□□□ 0.36
KLHL1Q9NR64 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms