Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 AC034236.2-201ENST00000606662 1610 ntBASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.98■■□□□ 1.11
UPF3BQ9BZI7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 UNC93B2-201ENST00000285383 730 ntBASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 AP003041.3-201ENST00000527151 707 ntBASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 FZD10-202ENST00000539839 3282 ntBASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 KRT17P2-201ENST00000300992 1314 ntBASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPF3BQ9BZI7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF3BQ9BZI7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
UPF3BQ9BZI7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UPF3BQ9BZI7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
UPF3BQ9BZI7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 MIR4785-201ENST00000585005 73 ntBASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF3BQ9BZI7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms