Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL023284.2-201ENST00000405850 579 ntBASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC134043.2-201ENST00000624206 2238 ntBASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 GMCL1P1-201ENST00000463439 1581 ntBASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHANK2-AS3Q9BTD1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC034236.2-201ENST00000606662 1610 ntBASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 RPPH1-201ENST00000516869 333 ntBASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHANK2-AS3Q9BTD1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC096733.2-201ENST00000609937 1394 ntBASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHANK2-AS3Q9BTD1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 GPAT2P1-201ENST00000444924 1672 ntBASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 LTB4R2-202ENST00000528054 3092 ntBASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms