Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 PRSS44-201ENST00000515154 1146 ntBASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NSMCE2Q96MF7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NSMCE2Q96MF7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NSMCE2Q96MF7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NSMCE2Q96MF7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NSMCE2Q96MF7 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.38
NSMCE2Q96MF7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 GUSBP6-202ENST00000438529 1198 ntBASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 HTR7P1-201ENST00000538670 1336 ntBASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
NSMCE2Q96MF7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 AC083880.1-201ENST00000608266 535 ntBASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NSMCE2Q96MF7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NSMCE2Q96MF7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NSMCE2Q96MF7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms