Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.58■□□□□ 0.08
SPG11Q96JI7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 FAM197Y3-203ENST00000618346 717 ntBASIC15.58■□□□□ 0.08
SPG11Q96JI7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 AC083906.6-201ENST00000641366 219 ntBASIC15.57■□□□□ 0.08
SPG11Q96JI7 AC079781.4-201ENST00000641908 219 ntBASIC15.57■□□□□ 0.08
SPG11Q96JI7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.57■□□□□ 0.08
SPG11Q96JI7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPG11Q96JI7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 CYMP-203ENST00000474680 1263 ntBASIC15.56■□□□□ 0.08
SPG11Q96JI7 KRT18P41-201ENST00000518924 1277 ntBASIC15.56■□□□□ 0.08
SPG11Q96JI7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 AC021087.4-201ENST00000563761 564 ntBASIC15.56■□□□□ 0.08
SPG11Q96JI7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 TP73-AS1-210ENST00000637775 1455 ntBASIC15.56■□□□□ 0.08
SPG11Q96JI7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 AL357033.4-201ENST00000617703 1807 ntBASIC15.56■□□□□ 0.08
SPG11Q96JI7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPG11Q96JI7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SPG11Q96JI7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms