Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 AF228730.6-201ENST00000641497 218 ntBASIC19.89■□□□□ 0.77
LRCH3Q96II8 AC084121.3-201ENST00000641716 218 ntBASIC19.89■□□□□ 0.77
LRCH3Q96II8 AC105233.6-201ENST00000642093 218 ntBASIC19.89■□□□□ 0.77
LRCH3Q96II8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 MCCD1P2-201ENST00000423228 335 ntBASIC19.88■□□□□ 0.77
LRCH3Q96II8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 AC093028.1-201ENST00000622998 982 ntBASIC19.88■□□□□ 0.77
LRCH3Q96II8 AC008735.5-201ENST00000623544 497 ntBASIC19.88■□□□□ 0.77
LRCH3Q96II8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRCH3Q96II8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.88■□□□□ 0.77
LRCH3Q96II8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AP002414.3-201ENST00000589352 1468 ntBASIC19.87■□□□□ 0.77
LRCH3Q96II8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
LRCH3Q96II8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRCH3Q96II8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC063926.2-201ENST00000623766 1308 ntBASIC19.86■□□□□ 0.77
LRCH3Q96II8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC025062.2-201ENST00000605477 670 ntBASIC19.86■□□□□ 0.77
LRCH3Q96II8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRCH3Q96II8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRCH3Q96II8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.86■□□□□ 0.77
LRCH3Q96II8 AC007225.1-201ENST00000566331 1836 ntBASIC19.86■□□□□ 0.77
LRCH3Q96II8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRCH3Q96II8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.85■□□□□ 0.77
LRCH3Q96II8 AC009947.1-201ENST00000444350 727 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms