Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 MIR564-202ENST00000385049 94 ntBASIC16.56■□□□□ 0.24
PTP4A1Q93096 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.56■□□□□ 0.24
PTP4A1Q93096 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 GNAS-203ENST00000306120 1878 ntBASIC16.56■□□□□ 0.24
PTP4A1Q93096 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PTP4A1Q93096 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTP4A1Q93096 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 MIR718-201ENST00000390190 70 ntBASIC16.55■□□□□ 0.24
PTP4A1Q93096 AC012618.2-201ENST00000428058 849 ntBASIC16.55■□□□□ 0.24
PTP4A1Q93096 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 B3GAT3P1-201ENST00000471720 806 ntBASIC16.55■□□□□ 0.24
PTP4A1Q93096 AC233702.5-201ENST00000584107 538 ntBASIC16.55■□□□□ 0.24
PTP4A1Q93096 MIR6786-201ENST00000616843 113 ntBASIC16.55■□□□□ 0.24
PTP4A1Q93096 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTP4A1Q93096 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTP4A1Q93096 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 MESTP1-201ENST00000404287 994 ntBASIC16.54■□□□□ 0.24
PTP4A1Q93096 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 AP000692.2-201ENST00000608391 879 ntBASIC16.54■□□□□ 0.24
PTP4A1Q93096 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A1Q93096 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A1Q93096 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms