Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 AC130371.2-201ENST00000619443 611 ntBASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 AC073648.6-201ENST00000641589 218 ntBASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4Y2Q8TD47 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AL023284.2-201ENST00000405850 579 ntBASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AC034236.2-201ENST00000606662 1610 ntBASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 KRT16P1-201ENST00000399124 1418 ntBASIC16.11■□□□□ 0.17
RPS4Y2Q8TD47 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 AC093010.1-201ENST00000473625 1624 ntBASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PRORSD1P-201ENST00000295112 541 ntBASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 AP002982.1-201ENST00000492365 877 ntBASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms