Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MINOS1P3-201ENST00000457048 203 ntBASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28.73■■■□□ 2.19
CFAP43Q8NDM7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 AC024563.2-201ENST00000603282 481 ntBASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 ANO7L1-203ENST00000602586 1720 ntBASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
CFAP43Q8NDM7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 AC005336.2-201ENST00000593183 939 ntBASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFAP43Q8NDM7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC28.7■■■□□ 2.19
CFAP43Q8NDM7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 HNRNPDP1-201ENST00000439535 754 ntBASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 FAM197Y3-203ENST00000618346 717 ntBASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 AL355877.3-201ENST00000622820 899 ntBASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC28.7■■■□□ 2.18
CFAP43Q8NDM7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 AC034105.1-201ENST00000563488 319 ntBASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFAP43Q8NDM7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 HNRNPA1P28-201ENST00000424481 961 ntBASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 AC113404.2-201ENST00000507884 177 ntBASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.68■■■□□ 2.18
CFAP43Q8NDM7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 MED15P5-201ENST00000423150 992 ntBASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 FAM215A-202ENST00000632077 792 ntBASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 AL353692.3-201ENST00000407031 1396 ntBASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CFAP43Q8NDM7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms