Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
RETREG2Q8NC44 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 AC090164.3-201ENST00000610780 2143 ntBASIC20.83■□□□□ 0.93
RETREG2Q8NC44 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 WIZP1-201ENST00000531444 2299 ntBASIC20.83■□□□□ 0.93
RETREG2Q8NC44 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 AC004870.1-201ENST00000315132 882 ntBASIC20.83■□□□□ 0.93
RETREG2Q8NC44 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.83■□□□□ 0.93
RETREG2Q8NC44 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 AC111152.3-201ENST00000569699 673 ntBASIC20.83■□□□□ 0.93
RETREG2Q8NC44 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RETREG2Q8NC44 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 AC016734.2-201ENST00000624325 1377 ntBASIC20.83■□□□□ 0.92
RETREG2Q8NC44 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RETREG2Q8NC44 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RETREG2Q8NC44 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 AL845331.1-201ENST00000424978 1190 ntBASIC20.81■□□□□ 0.92
RETREG2Q8NC44 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RETREG2Q8NC44 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 AL109659.2-201ENST00000606809 1674 ntBASIC20.8■□□□□ 0.92
RETREG2Q8NC44 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 RCC2P3-201ENST00000418112 1537 ntBASIC20.8■□□□□ 0.92
RETREG2Q8NC44 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 AC246785.2-201ENST00000432512 513 ntBASIC20.8■□□□□ 0.92
RETREG2Q8NC44 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms