Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 BX842568.4-201ENST00000421222 227 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 RPS2P1-201ENST00000434010 821 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 AC116407.3-201ENST00000623905 1129 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 MIR1233-2-201ENST00000408138 82 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 MIR1233-1-201ENST00000408722 82 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 AC009154.2-201ENST00000621177 724 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 AL139288.1-201ENST00000623748 933 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 FAM215A-202ENST00000632077 792 ntBASIC17.29■□□□□ 0.36
COL27A1Q8IZC6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 AC008735.5-201ENST00000623544 497 ntBASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL27A1Q8IZC6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 MTCL1P1-201ENST00000446207 792 ntBASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 AC009533.2-201ENST00000543664 586 ntBASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 AC025062.2-201ENST00000605477 670 ntBASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 AC055717.3-201ENST00000622967 595 ntBASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL27A1Q8IZC6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 PMS2P7-201ENST00000506558 1336 ntBASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 OR7E14P-202ENST00000530490 1290 ntBASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.27■□□□□ 0.35
COL27A1Q8IZC6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms