Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 AP000997.3-201ENST00000623333 2250 ntBASIC22.78■■□□□ 1.24
SMC5Q8IY18 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 FAM87A-204ENST00000613235 858 ntBASIC22.78■■□□□ 1.24
SMC5Q8IY18 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMC5Q8IY18 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.78■■□□□ 1.24
SMC5Q8IY18 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 SEC1P-202ENST00000473944 940 ntBASIC22.77■■□□□ 1.24
SMC5Q8IY18 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.77■■□□□ 1.24
SMC5Q8IY18 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.77■■□□□ 1.24
SMC5Q8IY18 AC134043.2-201ENST00000624206 2238 ntBASIC22.77■■□□□ 1.24
SMC5Q8IY18 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMC5Q8IY18 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms