Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 PHGDH-209ENST00000641074 1780 ntBASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 AL024508.2-201ENST00000607749 1894 ntBASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 BX664615.1-201ENST00000443558 458 ntBASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 GCSHP2-201ENST00000560971 527 ntBASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COLCA1Q6ZS62 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 LINC01126-201ENST00000623515 1646 ntBASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 NOC2LP1-202ENST00000452600 2235 ntBASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
COLCA1Q6ZS62 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 AL137013.1-201ENST00000432946 1228 ntBASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 ATP5G1P1-201ENST00000448724 379 ntBASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 COX11P1-201ENST00000489116 835 ntBASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 LINC01023-201ENST00000606054 436 ntBASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 AC099343.3-201ENST00000605834 2503 ntBASIC15.83■□□□□ 0.12
COLCA1Q6ZS62 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 PVRIG2P-201ENST00000435460 978 ntBASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.82■□□□□ 0.12
COLCA1Q6ZS62 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms