Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AL121761.2-201ENST00000598007 1648 ntBASIC11.68□□□□□ -0.54
LINC00575Q6W349 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AL118508.1-201ENST00000613502 2345 ntBASIC11.68□□□□□ -0.54
LINC00575Q6W349 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 RPS2P52-201ENST00000469610 820 ntBASIC11.68□□□□□ -0.54
LINC00575Q6W349 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 RAP2CP1-201ENST00000605103 478 ntBASIC11.68□□□□□ -0.54
LINC00575Q6W349 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AL121906.2-201ENST00000621597 723 ntBASIC11.68□□□□□ -0.54
LINC00575Q6W349 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 STK4-201ENST00000372801 2038 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00575Q6W349 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00575Q6W349 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 LSM12P1-201ENST00000411836 588 ntBASIC11.67□□□□□ -0.54
LINC00575Q6W349 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 AC005181.1-201ENST00000604782 1256 ntBASIC11.67□□□□□ -0.54
LINC00575Q6W349 OR10C1-204ENST00000622521 1039 ntBASIC11.67□□□□□ -0.54
LINC00575Q6W349 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC00575Q6W349 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 AP001094.4-201ENST00000579008 2176 ntBASIC11.67□□□□□ -0.54
LINC00575Q6W349 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 AC006116.8-202ENST00000587620 1550 ntBASIC11.67□□□□□ -0.54
LINC00575Q6W349 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC00575Q6W349 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00575Q6W349 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 KRT8P32-201ENST00000512863 1461 ntBASIC11.66□□□□□ -0.54
LINC00575Q6W349 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC00575Q6W349 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms