Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PGAM5P1-201ENST00000518923 814 ntBASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 AC104109.2-201ENST00000602919 1418 ntBASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CNKSR3Q6P9H4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 AC005104.2-201ENST00000427818 678 ntBASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 ABCD1P5-201ENST00000445663 754 ntBASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 SART3-203ENST00000546611 1184 ntBASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 AC027601.4-201ENST00000611259 610 ntBASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 AC125634.1-201ENST00000438758 1403 ntBASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNKSR3Q6P9H4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 RPS2P1-201ENST00000434010 821 ntBASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 FAM197Y3-203ENST00000618346 717 ntBASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNKSR3Q6P9H4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 AL024508.2-201ENST00000607749 1894 ntBASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 HLA-J-201ENST00000462773 1622 ntBASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 AC083906.6-201ENST00000641366 219 ntBASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 AIRN-201ENST00000601203 4374 ntBASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.73■□□□□ 0.75
CNKSR3Q6P9H4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 MED15P5-201ENST00000423150 992 ntBASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms