Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 PKD1P6-201ENST00000343738 4769 ntBASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 ALG1L5P-201ENST00000482043 771 ntBASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCRAQ6ISU1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 AL137060.1-201ENST00000618151 2648 ntBASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 MIR1199-201ENST00000621445 119 ntBASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 Z98044.1-201ENST00000632503 1764 ntBASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCRAQ6ISU1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.89■□□□□ 0.62
PTCRAQ6ISU1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 SPCS2P1-201ENST00000561636 679 ntBASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 AC097374.2-201ENST00000618617 1306 ntBASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTCRAQ6ISU1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 MTCL1P1-201ENST00000446207 792 ntBASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 KRT18P2-201ENST00000447938 1258 ntBASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 AC005593.1-201ENST00000624894 515 ntBASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 AL163051.1-201ENST00000569214 1512 ntBASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCRAQ6ISU1 FEM1AP3-201ENST00000403722 1741 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms