Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 GMCL1P1-201ENST00000463439 1581 ntBASIC19.88■□□□□ 0.77
KRT39Q6A163 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT39Q6A163 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 COX11P1-201ENST00000489116 835 ntBASIC19.88■□□□□ 0.77
KRT39Q6A163 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT39Q6A163 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT39Q6A163 AL023973.1-201ENST00000624619 620 ntBASIC19.88■□□□□ 0.77
KRT39Q6A163 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 AL031432.5-201ENST00000641059 760 ntBASIC19.88■□□□□ 0.77
KRT39Q6A163 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT39Q6A163 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 ESPNP-201ENST00000270691 2015 ntBASIC19.88■□□□□ 0.77
KRT39Q6A163 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT39Q6A163 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT39Q6A163 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
KRT39Q6A163 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 AC135776.1-201ENST00000319817 2481 ntBASIC19.87■□□□□ 0.77
KRT39Q6A163 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT39Q6A163 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT39Q6A163 BX664615.1-201ENST00000443558 458 ntBASIC19.87■□□□□ 0.77
KRT39Q6A163 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT39Q6A163 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT39Q6A163 GCSHP2-201ENST00000560971 527 ntBASIC19.87■□□□□ 0.77
KRT39Q6A163 AC140113.3-201ENST00000605663 199 ntBASIC19.87■□□□□ 0.77
KRT39Q6A163 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT39Q6A163 AL354751.1-201ENST00000412768 1863 ntBASIC19.87■□□□□ 0.77
KRT39Q6A163 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
KRT39Q6A163 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT39Q6A163 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT39Q6A163 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KRT39Q6A163 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KRT39Q6A163 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KRT39Q6A163 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.86■□□□□ 0.77
KRT39Q6A163 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
KRT39Q6A163 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
KRT39Q6A163 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
KRT39Q6A163 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT39Q6A163 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 AC093677.2-201ENST00000600169 1863 ntBASIC19.86■□□□□ 0.77
KRT39Q6A163 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT39Q6A163 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT39Q6A163 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT39Q6A163 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT39Q6A163 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT39Q6A163 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT39Q6A163 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KRT39Q6A163 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 ABALON-201ENST00000629058 1903 ntBASIC19.85■□□□□ 0.77
KRT39Q6A163 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
KRT39Q6A163 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT39Q6A163 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT39Q6A163 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms