Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 AC026366.1-201ENST00000488803 879 ntBASIC17.75■□□□□ 0.43
RNF220Q5VTB9 RNA5SP413-201ENST00000516373 109 ntBASIC17.75■□□□□ 0.43
RNF220Q5VTB9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.75■□□□□ 0.43
RNF220Q5VTB9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF220Q5VTB9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 AC069544.1-201ENST00000609399 999 ntBASIC17.74■□□□□ 0.43
RNF220Q5VTB9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 NBPF21P-201ENST00000425093 1451 ntBASIC17.74■□□□□ 0.43
RNF220Q5VTB9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF220Q5VTB9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 KRT17P3-201ENST00000420566 1262 ntBASIC17.73■□□□□ 0.43
RNF220Q5VTB9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms