Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 AC009102.3-201ENST00000623118 1491 ntBASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 AC104692.2-201ENST00000603054 253 ntBASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 AL031008.1-201ENST00000619963 541 ntBASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 MYLKP1-201ENST00000509077 1580 ntBASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNFT1Q5M7Z0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 AC079781.3-201ENST00000449110 356 ntBASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 AC009078.2-202ENST00000463353 338 ntBASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNFT1Q5M7Z0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 KRT8P10-201ENST00000450021 1447 ntBASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNFT1Q5M7Z0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 AL024508.2-201ENST00000607749 1894 ntBASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RNFT1Q5M7Z0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms