Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN6P56747 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
CLDN6P56747 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN6P56747 AF186996.4-201ENST00000467186 377 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN6P56747 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN6P56747 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN6P56747 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN6P56747 AC106730.1-201ENST00000566722 1090 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN6P56747 AC008608.2-201ENST00000606089 416 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN6P56747 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN6P56747 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN6P56747 AC007952.6-201ENST00000573168 2673 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 AC003957.1-201ENST00000625108 2673 ntBASIC17.65■□□□□ 0.42
CLDN6P56747 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN6P56747 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.64■□□□□ 0.42
CLDN6P56747 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CLDN6P56747 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN6P56747 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN6P56747 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN6P56747 TERC-201ENST00000602385 541 ntBASIC17.64■□□□□ 0.41
CLDN6P56747 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN6P56747 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN6P56747 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN6P56747 AC125437.2-201ENST00000625180 2167 ntBASIC17.64■□□□□ 0.41
CLDN6P56747 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN6P56747 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN6P56747 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN6P56747 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN6P56747 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 RPL13AP23-201ENST00000480739 586 ntBASIC17.63■□□□□ 0.41
CLDN6P56747 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN6P56747 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.63■□□□□ 0.41
CLDN6P56747 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN6P56747 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CLDN6P56747 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN6P56747 RNF165-205ENST00000588679 2904 ntBASIC17.63■□□□□ 0.41
CLDN6P56747 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN6P56747 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN6P56747 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN6P56747 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN6P56747 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN6P56747 BX842568.4-201ENST00000421222 227 ntBASIC17.62■□□□□ 0.41
CLDN6P56747 HNRNPDP1-201ENST00000439535 754 ntBASIC17.62■□□□□ 0.41
CLDN6P56747 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN6P56747 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN6P56747 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.62■□□□□ 0.41
CLDN6P56747 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms