Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC00265-3P-201ENST00000447588 903 ntBASIC17.87■□□□□ 0.45
PDX1P52945 TOB2P1-201ENST00000469761 992 ntBASIC17.87■□□□□ 0.45
PDX1P52945 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.87■□□□□ 0.45
PDX1P52945 AC104390.1-201ENST00000555663 520 ntBASIC17.87■□□□□ 0.45
PDX1P52945 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.87■□□□□ 0.45
PDX1P52945 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.87■□□□□ 0.45
PDX1P52945 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.87■□□□□ 0.45
PDX1P52945 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.87■□□□□ 0.45
PDX1P52945 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDX1P52945 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 Z83836.1-201ENST00000624605 1642 ntBASIC17.87■□□□□ 0.45
PDX1P52945 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 AL020996.1-203ENST00000536896 2307 ntBASIC17.86■□□□□ 0.45
PDX1P52945 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.86■□□□□ 0.45
PDX1P52945 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 EMBP1-201ENST00000458200 901 ntBASIC17.86■□□□□ 0.45
PDX1P52945 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 AP000867.3-201ENST00000524675 377 ntBASIC17.86■□□□□ 0.45
PDX1P52945 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.86■□□□□ 0.45
PDX1P52945 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.86■□□□□ 0.45
PDX1P52945 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.86■□□□□ 0.45
PDX1P52945 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 KRT8P7-201ENST00000533003 1432 ntBASIC17.86■□□□□ 0.45
PDX1P52945 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDX1P52945 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PDX1P52945 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDX1P52945 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PDX1P52945 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.85■□□□□ 0.45
PDX1P52945 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.85■□□□□ 0.45
PDX1P52945 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 AC009078.2-202ENST00000463353 338 ntBASIC17.85■□□□□ 0.45
PDX1P52945 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.85■□□□□ 0.45
PDX1P52945 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.85■□□□□ 0.45
PDX1P52945 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDX1P52945 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDX1P52945 AL031008.1-201ENST00000619963 541 ntBASIC17.85■□□□□ 0.45
PDX1P52945 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms