Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN3P51790 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN3P51790 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 RN7SL606P-201ENST00000472779 293 ntBASIC20.2■□□□□ 0.82
CLCN3P51790 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN3P51790 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN3P51790 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLCN3P51790 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN3P51790 AL024508.2-201ENST00000607749 1894 ntBASIC20.2■□□□□ 0.82
CLCN3P51790 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN3P51790 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN3P51790 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN3P51790 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLCN3P51790 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN3P51790 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN3P51790 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN3P51790 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN3P51790 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN3P51790 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN3P51790 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 AC233702.3-201ENST00000578656 1387 ntBASIC20.19■□□□□ 0.82
CLCN3P51790 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN3P51790 LINC00167-201ENST00000530583 1419 ntBASIC20.19■□□□□ 0.82
CLCN3P51790 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN3P51790 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN3P51790 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CLCN3P51790 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CLCN3P51790 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN3P51790 UNC93B7-201ENST00000509439 705 ntBASIC20.18■□□□□ 0.82
CLCN3P51790 GUSBP12-201ENST00000513727 720 ntBASIC20.18■□□□□ 0.82
CLCN3P51790 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN3P51790 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN3P51790 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLCN3P51790 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN3P51790 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN3P51790 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN3P51790 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN3P51790 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN3P51790 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 NUS1P1-201ENST00000446295 882 ntBASIC20.17■□□□□ 0.82
CLCN3P51790 AC091607.1-201ENST00000490318 1060 ntBASIC20.17■□□□□ 0.82
CLCN3P51790 AC012615.1-201ENST00000565797 1299 ntBASIC20.17■□□□□ 0.82
CLCN3P51790 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 AL732292.2-201ENST00000609649 430 ntBASIC20.17■□□□□ 0.82
CLCN3P51790 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN3P51790 AL691432.3-201ENST00000621860 400 ntBASIC20.17■□□□□ 0.82
CLCN3P51790 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLCN3P51790 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CLCN3P51790 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN3P51790 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLCN3P51790 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN3P51790 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN3P51790 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms