Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC32.41■■■□□ 2.78
NCAPD3P42695 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NCAPD3P42695 AC006557.2-201ENST00000592985 1240 ntBASIC32.41■■■□□ 2.78
NCAPD3P42695 MIR1199-201ENST00000621445 119 ntBASIC32.41■■■□□ 2.78
NCAPD3P42695 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
NCAPD3P42695 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NCAPD3P42695 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
NCAPD3P42695 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
NCAPD3P42695 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
NCAPD3P42695 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 SRP19-202ENST00000445150 833 ntTSL 2 BASIC32.4■■■□□ 2.78
NCAPD3P42695 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC32.4■■■□□ 2.78
NCAPD3P42695 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
NCAPD3P42695 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
NCAPD3P42695 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC32.39■■■□□ 2.78
NCAPD3P42695 AC009102.3-201ENST00000623118 1491 ntBASIC32.39■■■□□ 2.78
NCAPD3P42695 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC32.39■■■□□ 2.78
NCAPD3P42695 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC32.39■■■□□ 2.78
NCAPD3P42695 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
NCAPD3P42695 SDCCAG3P1-201ENST00000589292 1150 ntBASIC32.39■■■□□ 2.78
NCAPD3P42695 AL022326.1-202ENST00000641533 845 ntBASIC32.39■■■□□ 2.78
NCAPD3P42695 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
NCAPD3P42695 ELL2P1-201ENST00000413990 1906 ntBASIC32.39■■■□□ 2.78
NCAPD3P42695 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC32.38■■■□□ 2.77
NCAPD3P42695 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC32.38■■■□□ 2.77
NCAPD3P42695 BCRP1-201ENST00000444246 691 ntBASIC32.38■■■□□ 2.77
NCAPD3P42695 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
NCAPD3P42695 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
NCAPD3P42695 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC32.38■■■□□ 2.77
NCAPD3P42695 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC32.38■■■□□ 2.77
NCAPD3P42695 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NCAPD3P42695 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC32.37■■■□□ 2.77
NCAPD3P42695 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC32.37■■■□□ 2.77
NCAPD3P42695 AC136632.2-201ENST00000512891 861 ntBASIC32.37■■■□□ 2.77
NCAPD3P42695 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC32.37■■■□□ 2.77
NCAPD3P42695 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC32.37■■■□□ 2.77
NCAPD3P42695 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC32.37■■■□□ 2.77
NCAPD3P42695 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC32.37■■■□□ 2.77
NCAPD3P42695 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
NCAPD3P42695 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
NCAPD3P42695 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC32.37■■■□□ 2.77
NCAPD3P42695 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NCAPD3P42695 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
NCAPD3P42695 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC32.36■■■□□ 2.77
NCAPD3P42695 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC32.36■■■□□ 2.77
NCAPD3P42695 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC32.36■■■□□ 2.77
NCAPD3P42695 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
NCAPD3P42695 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
NCAPD3P42695 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
NCAPD3P42695 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC32.36■■■□□ 2.77
NCAPD3P42695 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 RPL28-205ENST00000558131 444 ntTSL 5 BASIC32.35■■■□□ 2.77
NCAPD3P42695 AL096865.1-201ENST00000606796 927 ntBASIC32.35■■■□□ 2.77
NCAPD3P42695 AC005593.1-201ENST00000624894 515 ntBASIC32.35■■■□□ 2.77
NCAPD3P42695 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC32.35■■■□□ 2.77
NCAPD3P42695 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC32.35■■■□□ 2.77
NCAPD3P42695 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCAPD3P42695 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC32.35■■■□□ 2.77
NCAPD3P42695 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
NCAPD3P42695 SIGLEC16-201ENST00000599858 1437 ntBASIC32.34■■■□□ 2.77
NCAPD3P42695 PMPCAP1-201ENST00000508114 1576 ntBASIC32.34■■■□□ 2.77
NCAPD3P42695 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NCAPD3P42695 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC32.34■■■□□ 2.77
NCAPD3P42695 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NCAPD3P42695 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NCAPD3P42695 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NCAPD3P42695 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
NCAPD3P42695 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
NCAPD3P42695 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NCAPD3P42695 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC32.34■■■□□ 2.77
NCAPD3P42695 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC32.34■■■□□ 2.77
NCAPD3P42695 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC32.34■■■□□ 2.77
NCAPD3P42695 BX005266.1-201ENST00000473402 457 ntBASIC32.34■■■□□ 2.77
NCAPD3P42695 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms