Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.29■■□□□ 1.32
COL15A1P39059 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
COL15A1P39059 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.29■■□□□ 1.32
COL15A1P39059 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
COL15A1P39059 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.29■■□□□ 1.32
COL15A1P39059 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
COL15A1P39059 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
COL15A1P39059 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.28■■□□□ 1.32
COL15A1P39059 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 AF186996.4-201ENST00000467186 377 ntBASIC23.28■■□□□ 1.32
COL15A1P39059 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.28■■□□□ 1.32
COL15A1P39059 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.28■■□□□ 1.32
COL15A1P39059 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.28■■□□□ 1.32
COL15A1P39059 AC139530.3-201ENST00000620344 690 ntBASIC23.28■■□□□ 1.32
COL15A1P39059 AC117500.6-201ENST00000624871 588 ntBASIC23.28■■□□□ 1.32
COL15A1P39059 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL15A1P39059 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.28■■□□□ 1.32
COL15A1P39059 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
COL15A1P39059 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.27■■□□□ 1.32
COL15A1P39059 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.27■■□□□ 1.32
COL15A1P39059 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 AC113404.2-201ENST00000507884 177 ntBASIC23.27■■□□□ 1.32
COL15A1P39059 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.27■■□□□ 1.32
COL15A1P39059 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.27■■□□□ 1.32
COL15A1P39059 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.27■■□□□ 1.32
COL15A1P39059 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.27■■□□□ 1.32
COL15A1P39059 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.27■■□□□ 1.32
COL15A1P39059 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.27■■□□□ 1.32
COL15A1P39059 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL15A1P39059 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL15A1P39059 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL15A1P39059 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
COL15A1P39059 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL15A1P39059 KRT18P13-201ENST00000400056 1290 ntBASIC23.27■■□□□ 1.31
COL15A1P39059 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.27■■□□□ 1.31
COL15A1P39059 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL15A1P39059 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.27■■□□□ 1.31
COL15A1P39059 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.27■■□□□ 1.31
COL15A1P39059 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.26■■□□□ 1.31
COL15A1P39059 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL15A1P39059 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.26■■□□□ 1.31
COL15A1P39059 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL15A1P39059 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL15A1P39059 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL15A1P39059 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
COL15A1P39059 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.26■■□□□ 1.31
COL15A1P39059 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.26■■□□□ 1.31
COL15A1P39059 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.26■■□□□ 1.31
COL15A1P39059 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.26■■□□□ 1.31
COL15A1P39059 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL15A1P39059 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL15A1P39059 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.25■■□□□ 1.31
COL15A1P39059 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL15A1P39059 MIR149-201ENST00000384879 89 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms