Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 AC092647.4-201ENST00000457211 535 ntBASIC18.33■□□□□ 0.52
HMGCLP35914 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCLP35914 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCLP35914 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCLP35914 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
HMGCLP35914 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLP35914 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HMGCLP35914 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLP35914 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HMGCLP35914 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
HMGCLP35914 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCLP35914 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCLP35914 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCLP35914 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGCLP35914 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 ESPNP-201ENST00000270691 2015 ntBASIC18.32■□□□□ 0.52
HMGCLP35914 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGCLP35914 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 AL359075.1-203ENST00000462729 1002 ntBASIC18.32■□□□□ 0.52
HMGCLP35914 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCLP35914 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGCLP35914 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCLP35914 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCLP35914 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCLP35914 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCLP35914 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HMGCLP35914 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMGCLP35914 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 KRT18P38-201ENST00000449496 1282 ntBASIC18.31■□□□□ 0.52
HMGCLP35914 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCLP35914 AC079602.3-201ENST00000623931 403 ntBASIC18.31■□□□□ 0.52
HMGCLP35914 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCLP35914 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMGCLP35914 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
HMGCLP35914 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HMGCLP35914 BICD1-207ENST00000551848 1962 ntBASIC18.31■□□□□ 0.52
HMGCLP35914 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLP35914 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCLP35914 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 AL391807.1-203ENST00000604392 2365 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
HMGCLP35914 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 HLA-F-220ENST00000434407 884 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 AC112907.2-201ENST00000448639 330 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGCLP35914 AL049597.2-201ENST00000565575 961 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGCLP35914 AL136038.4-201ENST00000603606 1261 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGCLP35914 AL024508.2-201ENST00000607749 1894 ntBASIC18.3■□□□□ 0.52
HMGCLP35914 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HMGCLP35914 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLP35914 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HMGCLP35914 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGCLP35914 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLP35914 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HMGCLP35914 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms