Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TOP3BO95985 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.88■□□□□ 0.61
TOP3BO95985 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TOP3BO95985 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP3BO95985 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP3BO95985 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.87■□□□□ 0.61
TOP3BO95985 AL845331.1-201ENST00000424978 1190 ntBASIC18.87■□□□□ 0.61
TOP3BO95985 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP3BO95985 CCR12P-201ENST00000446203 998 ntBASIC18.87■□□□□ 0.61
TOP3BO95985 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP3BO95985 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.87■□□□□ 0.61
TOP3BO95985 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 VENTXP5-201ENST00000523979 775 ntBASIC18.87■□□□□ 0.61
TOP3BO95985 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TOP3BO95985 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.87■□□□□ 0.61
TOP3BO95985 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.87■□□□□ 0.61
TOP3BO95985 AC131212.4-201ENST00000623606 975 ntBASIC18.87■□□□□ 0.61
TOP3BO95985 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
TOP3BO95985 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TOP3BO95985 PCDHB18P-201ENST00000524813 2368 ntBASIC18.86■□□□□ 0.61
TOP3BO95985 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 AP000593.1-201ENST00000393668 712 ntBASIC18.86■□□□□ 0.61
TOP3BO95985 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.86■□□□□ 0.61
TOP3BO95985 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.86■□□□□ 0.61
TOP3BO95985 AC004263.2-201ENST00000617183 678 ntBASIC18.86■□□□□ 0.61
TOP3BO95985 AC011298.2-201ENST00000617989 482 ntBASIC18.86■□□□□ 0.61
TOP3BO95985 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.86■□□□□ 0.61
TOP3BO95985 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.86■□□□□ 0.61
TOP3BO95985 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.86■□□□□ 0.61
TOP3BO95985 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TOP3BO95985 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TOP3BO95985 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TOP3BO95985 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 NOC2LP1-202ENST00000452600 2235 ntBASIC18.85■□□□□ 0.61
TOP3BO95985 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.85■□□□□ 0.61
TOP3BO95985 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 PRSS44-201ENST00000515154 1146 ntBASIC18.85■□□□□ 0.61
TOP3BO95985 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.85■□□□□ 0.61
TOP3BO95985 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 HLA-A-209ENST00000638375 975 ntBASIC18.85■□□□□ 0.61
TOP3BO95985 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.85■□□□□ 0.61
TOP3BO95985 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms