Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC28.62■■■□□ 2.17
PCF11O94913 MINOS1P3-201ENST00000457048 203 ntBASIC28.62■■■□□ 2.17
PCF11O94913 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.62■■■□□ 2.17
PCF11O94913 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC28.62■■■□□ 2.17
PCF11O94913 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC28.61■■■□□ 2.17
PCF11O94913 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCF11O94913 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCF11O94913 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCF11O94913 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC28.61■■■□□ 2.17
PCF11O94913 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.61■■■□□ 2.17
PCF11O94913 AC011840.4-201ENST00000578471 627 ntBASIC28.61■■■□□ 2.17
PCF11O94913 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCF11O94913 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
PCF11O94913 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PCF11O94913 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC28.6■■■□□ 2.17
PCF11O94913 AC112777.1-201ENST00000540175 1423 ntBASIC28.6■■■□□ 2.17
PCF11O94913 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC28.6■■■□□ 2.17
PCF11O94913 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC28.6■■■□□ 2.17
PCF11O94913 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 AC018712.1-201ENST00000455767 687 ntBASIC28.6■■■□□ 2.17
PCF11O94913 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC28.6■■■□□ 2.17
PCF11O94913 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.6■■■□□ 2.17
PCF11O94913 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC28.6■■■□□ 2.17
PCF11O94913 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
PCF11O94913 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
PCF11O94913 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCF11O94913 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCF11O94913 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.59■■■□□ 2.17
PCF11O94913 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.59■■■□□ 2.17
PCF11O94913 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCF11O94913 AC008608.2-201ENST00000606089 416 ntBASIC28.59■■■□□ 2.17
PCF11O94913 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC28.59■■■□□ 2.17
PCF11O94913 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCF11O94913 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCF11O94913 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC28.59■■■□□ 2.17
PCF11O94913 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
PCF11O94913 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.58■■■□□ 2.17
PCF11O94913 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC28.58■■■□□ 2.17
PCF11O94913 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC28.58■■■□□ 2.17
PCF11O94913 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
PCF11O94913 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
PCF11O94913 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
PCF11O94913 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC28.58■■■□□ 2.17
PCF11O94913 AL590627.1-203ENST00000421194 1026 ntBASIC28.58■■■□□ 2.17
PCF11O94913 CFL1-212ENST00000531413 636 ntTSL 3 BASIC28.58■■■□□ 2.17
PCF11O94913 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.58■■■□□ 2.17
PCF11O94913 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCF11O94913 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC28.57■■■□□ 2.16
PCF11O94913 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC28.57■■■□□ 2.16
PCF11O94913 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC28.57■■■□□ 2.16
PCF11O94913 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.57■■■□□ 2.16
PCF11O94913 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.57■■■□□ 2.16
PCF11O94913 CALM3-211ENST00000598871 561 ntTSL 4 BASIC28.57■■■□□ 2.16
PCF11O94913 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCF11O94913 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC28.57■■■□□ 2.16
PCF11O94913 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC28.56■■■□□ 2.16
PCF11O94913 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 AF228730.7-201ENST00000641842 219 ntBASIC28.56■■■□□ 2.16
PCF11O94913 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCF11O94913 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.56■■■□□ 2.16
PCF11O94913 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms