Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
USH2AO75445 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 RAC2-204ENST00000406508 893 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 TCAP-202ENST00000578283 583 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 AC116407.2-201ENST00000613639 860 ntBASIC8.18□□□□□ -1.1
USH2AO75445 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
USH2AO75445 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
USH2AO75445 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 AC004945.1-201ENST00000416738 983 ntBASIC8.18□□□□□ -1.1
USH2AO75445 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC8.18□□□□□ -1.1
USH2AO75445 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
USH2AO75445 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC8.18□□□□□ -1.1
USH2AO75445 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC8.18□□□□□ -1.1
USH2AO75445 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USH2AO75445 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
USH2AO75445 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC8.17□□□□□ -1.1
USH2AO75445 MEG3-211ENST00000452514 461 ntTSL 3 BASIC8.17□□□□□ -1.1
USH2AO75445 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 LSR-203ENST00000360798 1963 ntTSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC8.17□□□□□ -1.1
USH2AO75445 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 RNF34-208ENST00000555076 593 ntTSL 3 BASIC8.17□□□□□ -1.1
USH2AO75445 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 LINC01126-201ENST00000623515 1646 ntBASIC8.17□□□□□ -1.1
USH2AO75445 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC8.17□□□□□ -1.1
USH2AO75445 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC8.17□□□□□ -1.1
USH2AO75445 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 NAT14-202ENST00000587400 416 ntTSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
USH2AO75445 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
USH2AO75445 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC8.17□□□□□ -1.1
USH2AO75445 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
USH2AO75445 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 HNRNPFP1-201ENST00000391730 1133 ntBASIC8.16□□□□□ -1.1
USH2AO75445 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC8.16□□□□□ -1.1
USH2AO75445 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 AC136632.2-201ENST00000512891 861 ntBASIC8.16□□□□□ -1.1
USH2AO75445 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
USH2AO75445 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
USH2AO75445 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC8.16□□□□□ -1.1
USH2AO75445 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC8.16□□□□□ -1.1
USH2AO75445 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 AC097374.2-201ENST00000618617 1306 ntBASIC8.16□□□□□ -1.1
USH2AO75445 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USH2AO75445 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC8.16□□□□□ -1.1
USH2AO75445 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms