Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.3□□□□□ -0.12
PDE6DO43924 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PDE6DO43924 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDE6DO43924 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 TUBB8P6-201ENST00000436895 1288 ntBASIC14.29□□□□□ -0.12
PDE6DO43924 TSPY23P-201ENST00000440136 739 ntBASIC14.29□□□□□ -0.12
PDE6DO43924 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.29□□□□□ -0.12
PDE6DO43924 KRT18P16-201ENST00000510337 1294 ntBASIC14.29□□□□□ -0.12
PDE6DO43924 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.29□□□□□ -0.12
PDE6DO43924 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDE6DO43924 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.29□□□□□ -0.12
PDE6DO43924 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDE6DO43924 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
PDE6DO43924 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.28□□□□□ -0.12
PDE6DO43924 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDE6DO43924 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 GPX1P1-201ENST00000388829 606 ntBASIC14.28□□□□□ -0.12
PDE6DO43924 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.28□□□□□ -0.12
PDE6DO43924 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.28□□□□□ -0.12
PDE6DO43924 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.28□□□□□ -0.12
PDE6DO43924 AC068338.2-201ENST00000563278 1430 ntBASIC14.28□□□□□ -0.12
PDE6DO43924 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.28□□□□□ -0.12
PDE6DO43924 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 AC006116.8-202ENST00000587620 1550 ntBASIC14.28□□□□□ -0.12
PDE6DO43924 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.28□□□□□ -0.12
PDE6DO43924 LINC00602-201ENST00000629776 2065 ntBASIC14.28□□□□□ -0.12
PDE6DO43924 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.28□□□□□ -0.12
PDE6DO43924 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDE6DO43924 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDE6DO43924 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PDE6DO43924 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDE6DO43924 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDE6DO43924 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.27□□□□□ -0.12
PDE6DO43924 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.27□□□□□ -0.12
PDE6DO43924 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.27□□□□□ -0.12
PDE6DO43924 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDE6DO43924 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.27□□□□□ -0.12
PDE6DO43924 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.27□□□□□ -0.12
PDE6DO43924 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDE6DO43924 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDE6DO43924 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PDE6DO43924 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.27□□□□□ -0.13
PDE6DO43924 RAP2CP1-201ENST00000605103 478 ntBASIC14.27□□□□□ -0.13
PDE6DO43924 AL121906.2-201ENST00000621597 723 ntBASIC14.27□□□□□ -0.13
PDE6DO43924 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDE6DO43924 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms